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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs56319439 chr8:10846972 A/C SGK223 chr8:8175258-8244008:- 0.4 6.93 1.33E-11 Box Plot
THCA rs56330834 chr1:111155787 C/T DLD chr7:107531415-107572175:+ -0.29 -6.44 2.89E-10 Box Plot
THCA rs56333331 chr1:111155946 A/G DLD chr7:107531415-107572175:+ -0.28 -6.45 2.72E-10 Box Plot
THCA rs56334055 chr2:132256065 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.2 2.42E-12 Box Plot
THCA rs56360479 chr11:77718711 C/T INTS4L1 chr7:64601603-64694600:+ 0.59 7.26 1.59E-12 Box Plot
THCA rs56360603 chr1:111156083 A/G DLD chr7:107531415-107572175:+ -0.28 -6.45 2.72E-10 Box Plot
THCA rs56364145 chr10:51824357 G/T FAM21B chr10:47894023-47949412:+ 0.48 7.56 2.09E-13 Box Plot
THCA rs56364346 chr6:28050762 T/G BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs56364395 chr2:113236187 C/T RGPD5 chr2:110550335-110615272:+ 0.3 6 3.99E-9 Box Plot
THCA rs56366424 chr22:24054443 A/T IGLL3 chr22:25713888-25716191:+ 0.69 9.76 1.18E-20 Box Plot
THCA rs56369754 chr2:101061092 C/T LOC285359 chr3:101431278-101432259:+ 0.34 6.46 2.6E-10 Box Plot
THCA rs56375580 chr6:145722336 CA/C KIAA0895L chr16:67209505-67217943:- -0.15 -5.93 5.78E-9 Box Plot
THCA rs56375627 chr14:39837448 C/G LOC647288 chr13:75811890-75814517:- -0.55 -9.96 2.23E-21 Box Plot
THCA rs56387400 chr5:49813411 T/C LOC647121 chr1:121260910-121313686:+ -0.36 -7.57 1.92E-13 Box Plot
THCA rs56387690 chr11:78861178 C/A ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.37E-10 Box Plot